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- Conference participation -
Conferences
- Jun 2020
- Tutorial: Challenges in the study of algebraic models of biochemical reaction networks, Model Theory of Differential Equations, Algebraic Geometry, and their Applications to Modeling (Online) (webpage), Banff, Canada. (Link to the online talk)
- Feb 2020
- Applied Algebra in the analysis of Biochemical Reaction Networks, Geometry of Complex Webs (webpage), Les Diablerets, Switzerland.
- Jul 2019
- Some approaches to understand the parameter region of multistationarity, SIAM conference on Applied Algebraic Geometry (webpage), Bern, Switzerland.
- Jul 2019
- Algebraic approaches to determine and preclude Hopf bifurcations in reaction networks, Workshop Oscillations, Transients and Fluctuations in Complex Networks (webpage), Copenhagen.
- Jul 2018
- Node balanced steady states: unifying and generalizing complex and detailed balanced steady states, European Conference on Mathematical and Theoretical Biology (webpage), Lisbon.
- Jun 2018
- Algebraic problems in modeling biochemical reaction networks, Annual meeting Danish Mathematical Society (webpage), Aarhus.
- Jul 2017
- On the solutions to polynomials systems arising from chemical reaction networks. Foundations of Computational Mathematics, (webpage), Barcelona.
- Apr 2017
- Algebraic parametrizations in biochemical reaction networks. Barcelona Mathematical Days, (webpage), Barcelona.
- Aug 2015
- Model reduction and multistationarity. SIAM conference on Applied Algebraic Geometry, (webpage), Daejeon, South Korea.
- May 2015
- Algebraic methods for reaction networks in biology. Workshop on NonLinear Algebra, (webpage), Berlin.
- Aug 2014
- Inferring Multistationarity from Smaller Networks. Mini-symposium Developments in the Mathematics of Biochemical Reaction Networks. SIAM conference on the Life Sciences, (webpage), Charlotte (NC).
- Aug 2014
- Determining the Steady States of Biochemical Reaction Networks. Mini-tutorial Algebra in Life Sciences. SIAM conference on the Life Sciences, (webpage), Charlotte (NC).
- Jun 2014
- How can progress in algebra help systems biology?. Plenary speaker. XIV Encuentro de Álgebra Computacional y Aplicaciones: EACA 2014, (webpage), Barcelona.
- Sep 2013
- Álgebra, sistemas dinámicos y redes de reacciones bioquímicas. Plenary speaker. Congreso de Jóvenes Investigadores de la RSME, (webpage) Sevilla, Spain
- Aug 2013
- Identification of Multistationary Reaction Networks Modeled with Power-law Kinetics. Invited talk. SIAM conference on Applied Algebraic Geometry (AG13), Mini-symposium "Algebraic Aspects of Biochemical Reaction Networks" (webpage), Colorado, USA.
- Jul 2013
- Computational methods to preclude switch-like behavior: analysis of the Biomodels database. Contributed talk. International Conference on Intelligent Systems for Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) (webpage), Berlin, Germany.
- May 2013
- Constraining the parameter region of chemical reaction networks for switch-like behavior. Invited talk. Workshop Advances in Molecular Programming and Computing: Toward Chemistry as a New Information Technology, Copenhagen, Denmark.
- Aug 2012
- Preclusion of Switch Behavior in a Large Class of Reaction Networks. Invited talk. SIAM conference on the Life Sciences, Mini-symposium "Understanding Multistationarity in Biochemical Reaction Networks" (webpage), San Diego, USA.
- Jul 2012
- Qualitative inference on switch-like behaviour in networks of interacting species. Invited talk. 6th European Congress in Mathematics, Mini-symposium "Progress in Chemical Reaction Network Theory" (webpage), Kraków, Poland.
- Nov 2011
- Multiple equilibris en xarxes de reaccions químiques (catalan). Invited talk. Trobada de Joves Matemàtics, SCM, Barcelona.
- Jun 2011
- Enzyme sharing as a cause of multistationarity in signaling systems. Contributed talk. European Conference in Mathematical and Theoretical Biology (webpage), Kraków, Poland.
- May 2011
- Enzyme sharing as a cause of multistationarity in signaling systems. Contributed talk. International Congress on Molecular Systems Biology (ICMSB XII), Lleida, Catalonia.
- Apr 2011
- Enzyme sharing as a cause of multistationarity in signaling systems. Contributed talk. Mathematical and Statistical Aspects of Molecular Biology (MASAMB XXI), Vienna.
- Oct 2010
- Modularity and steady states of signaling cascades. Joint CRG-CRM meeting on Mathematics in Genomics and Systems Biology, Barcelona.
- Oct 2010
- An Algebraic Approach to Signaling Cascades with n Layers. Contributed talk. International Conference on Systems Biology, Edinburgh, Scotland.
- Apr 2008
- Higher arithmetic Chow groups. Conference Regulators and Heights in Algebraic Geometry, Edmonton (Canada).
- Jul 2006
- Higher arithmetic Chow groups. Recent Developments in the Arithmetic of Shimura Varieties and Arakelov Geometry, Barcelona (CRM).
- Oct 2004
- Function theory of higher logarithms. Arbeitsgemeinschaft mit aktuellem Thema: Polylogarithms. Mathematisches Forschungsinstitut Oberwolfach (Germany).
Workshops and meetings
- Oct-Nov 2014
- Understanding Microbial Communities; Function, Structure and Dynamics. Program at the Isaac Newton Institute (webpage), Cambridge
- Mar 2013
- AIM workshop: Mathematical problems arising from biochemical reaction networks (webpage), Palo Alto (California).
- Nov 2012
- Dagstuhl seminar: Symbolic Methods for Chemical Reaction Networks (Report) (Germany).
Organization of activities
- Jul 2019
- Mini-symposium "Polyhedral geometry methods for biochemical reaction networks". SIAM conference on Applied Algebraic Geometry, (webpage), Bern, Switzerland.
- Oct 2018
- Workshop on Advances in Chemical Reaction Network Theory (webpage), ESI Vienna.
- Jul 2018
- Mini-symposium "Algebraic, analytic, and algorithmic approaches to steady states of reaction networks". European Conference on Mathematics and Theoretical Biology (ECMTB), Lisbon, Portugal.
- Jul 2015
- Workshop on Mathematical Trends on Reaction Network Theory (webpage), Copenhagen.
- Aug 2014
- Mini-symposium "Algebraic Aspects of Biochemical Reaction Networks". SIAM conference on the Life Sciences, (webpage), Charlotte (NC).
- Jun 2014
- Mini-symposium "Algebraic methods for biochemical reaction networks". European Conference on Mathematics and Theoretical Biology (ECMTB), Gotheburg, Sweden.
- Aug 2012
- Mini-symposium "MS8: Understanding Multistationarity in Biochemical Reaction Networks". SIAM conference on the Life Sciences, San Diego, USA.
- Jul 2012
- Mini-symposium "Progress in Chemical Reaction Network Theory". 6th European Congress in Mathematics, Kraków, Poland.
Seminars
- May 2019
- Algebraic Methods for biochemical reaction networks. Mathematisches Kolloquium, Johannes Gutenberg Universität, Mainz.
- Feb 2018
- An algebraic approach to biochemical reaction networks. CoSy Seminar, (webpage), Uppsala University.
- Jun 2017
- Detecting multiple solutions to polynomial systems arising from biology. Seminari Geometria Algebraica, UB-UPC, (webpage), Barcelona.
- Apr 2017
- Algebraic parametrizations in biochemical reaction networks. KTH Applied Mathematics Seminar, Stockholm.
- Feb 2016
- An algebraic approach to biochemical reaction networks. Roskilde University.
- Apr 2015
- Positive solutions to polynomial equations and biochemical reaction networks. Eindhoven University.
- Nov 2012
- Mathematical methods for the analysis of reaction networks. Exeter University.
- May 2012
- On switch-like behavior in reaction networks. Niehls Bohr Institut, University of Copenhagen.
- Jan 2012
- Multiplicitat d'equilibris en xarxes d'interaccions. Universitat Politècnica de Catalunya.
- Jul 2010
- On the steady states of signaling cascades. University of Leipzig, Germany.
- Feb 2010
- On scoring functions for protein-protein docking. BIRC Wednesday Seminar. Bioinformatics Research Center, University of Aarhus, Denmark.
- Jan 2008
- Higher arithmetic Chow groups. Algebra Seminar. Florida State University, Tallahassee (Florida).
- Feb 2006
- On the comparison of the regulators of Beilinson and Goncharov. Forschung Seminar Arithmetische Geometrie, Universität Regensburg.
- Jun 2005
- Teoremes d'unicitat per classes característiques (catalan). Seminari de Geometria Algebraica (UB-UPC).
Posters
- Sep 2016
- Identifying regions for multistationarity. International Conference on Systems Biology. Barcelona.
- Dec 2009
- Statistical assessment and clustering properties of docking decoy datasets. CAPRI 4th evaluation meeting. Barcelona.
- Jun 2009
- Splitting statistical potentials to improve scoring of docking conformations. ISMB/ECCB'09. Stockholm (Sweden).